dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03809
Location and strand information: 545299 - 545955 (-)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel import ATP-binding protein NikE

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03810
Location and strand information: 545945 - 546655 (-)
Family: 3.A.1.5.10
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03811
Location and strand information: 546648 - 547433 (-)
Family: 3.A.1.5.40
Protein type: TC
Protein description: Nickel transport system permease protein NikC

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03812
Location and strand information: 547433 - 548371 (-)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel transport system permease protein NikB

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03813
Location and strand information: 548373 - 549944 (-)
Family: 3.A.1.5.5
Protein type: TC
Protein description: Nickel-binding periplasmic protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03814
Location and strand information: 549941 - 550627 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03815
Location and strand information: 550875 - 551417 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03816
Location and strand information: 551737 - 552918 (+)
Family: 2.A.1.2.42
Protein type: TC
Protein description: Inner membrane transport protein YdhC

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03817
Location and strand information: 553021 - 553764 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03818
Location and strand information: 554141 - 554830 (+)
Family: none
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03819
Location and strand information: 554896 - 558246 (-)
Family: CBM32|GH87|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5125
Protein molecular weight: 118480.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03820
Location and strand information: 558492 - 559046 (-)
Family: null
Protein type: null
Protein description: IS1595 family transposase ISSpgl1

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03821
Location and strand information: 559207 - 561441 (-)
Family: GH0|GH133
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4105
Protein molecular weight: 84859.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03822
Location and strand information: 561541 - 562428 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03823
Location and strand information: 562438 - 563292 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03824
Location and strand information: 563350 - 565062 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03825
Location and strand information: 565332 - 566876 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001542_38|CGC9
Gene ID: MGYG000001542_03826
Location and strand information: 566879 - 568588 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is cellulose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001542_03809	Nickel import ATP-binding protein NikE	TC	545299	545955	-	3.A.1.5.3
MGYG000001542_03810	Oligopeptide transport ATP-binding protein OppD	TC	545945	546655	-	3.A.1.5.10
MGYG000001542_03811	Nickel transport system permease protein NikC	TC	546648	547433	-	3.A.1.5.40
MGYG000001542_03812	Nickel transport system permease protein NikB	TC	547433	548371	-	3.A.1.5.3
MGYG000001542_03813	Nickel-binding periplasmic protein	TC	548373	549944	-	3.A.1.5.5
MGYG000001542_03814	hypothetical protein	null	549941	550627	-	Methyltransf_31
MGYG000001542_03815	hypothetical protein	null	550875	551417	-	Acetyltransf_3
MGYG000001542_03816	Inner membrane transport protein YdhC	TC	551737	552918	+	2.A.1.2.42
MGYG000001542_03817	hypothetical protein	null	553021	553764	-	Hydrolase_3
MGYG000001542_03818	hypothetical protein	TF	554141	554830	+	none
MGYG000001542_03819	hypothetical protein	CAZyme	554896	558246	-	CBM32\| GH87\| CBM35
MGYG000001542_03820	IS1595 family transposase ISSpgl1	null	558492	559046	-	Acetyltransf_3
MGYG000001542_03821	hypothetical protein	CAZyme	559207	561441	-	GH0\| GH133
MGYG000001542_03822	hypothetical protein	TC	561541	562428	-	3.A.1.1.9
MGYG000001542_03823	putative multiple-sugar transport system permease YteP	TC	562438	563292	-	3.A.1.1.9
MGYG000001542_03824	hypothetical protein	TC	563350	565062	-	3.A.1.1.9
MGYG000001542_03825	Sensor histidine kinase RcsC	TF	565332	566876	+	HTH_AraC+HTH_AraC
MGYG000001542_03826	hypothetical protein	TC	566879	568588	+	8.A.59.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature